miRBase entry: efu-mir-9271

Stem-loop efu-mir-9271


Accession
MI0028587
Description
Eptesicus fuscus efu-mir-9271 precursor miRNA


Sequence

cggggcagguucuggagaggguuucuuaggcuguagagaguggaagagccuuaguUAGGUCAGGAGAUGCUUCAUAGUCCagccccaguu
.(((((.((..(((..(((.(((((((.((((..(..(((.(......))))..)..))))))))))).)))..))).)).)))))....

Structure
---c     a  uu   ga   g       a    gu ga   u ga 
    ggggc gg  cug  gag guuucuu ggcu  a  gag g  a
    ||||| ||  |||  ||| ||||||| ||||  |  ||| |   
    ccccg CC  GAU  UUC UAGAGGA CUGG  u  uuc c  g
uuga     a  -U   AC   G       -    AU ga   - ga 


Annotation confidence Not enough data
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Genome context
JH977757.1: 904498-904587 [-]

Database links

Mature efu-miR-9271

Accession MIMAT0034903
Description Eptesicus fuscus efu-miR-9271 mature miRNA
Sequence 56 - UAGGUCAGGAGAUGCUUCAUAGUCC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545