miRBase entry: efu-mir-9265

Stem-loop efu-mir-9265


Accession
MI0028579
Description
Eptesicus fuscus efu-mir-9265 precursor miRNA


Sequence

gacagcuguguguuccuguuacgcuaccuguuccuugggcucaacuauuaggcUGAGCACAGAGGCUGUUAGGAGACAcccgggcugc
..(((((..(((((((((.((.(((..((((..(((((.((........)).))))).)))).))))).))))).))))...))))).

Structure
ga     -gu    -     u  c   ac    uc     g  caa 
  cagcu   gugu uccug ua gcu  cugu  cuugg cu   c
  |||||   |||| ||||| || |||  ||||  ||||| ||    
  gucgg   cACA AGGAU GU CGG  GACA  GAGUc ga   u
-c     gcc    G     U  -   -A    -C     g  uua 


Annotation confidence Not enough data
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Genome context
JH977806.1: 749959-750046 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-9265
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9265

Accession MIMAT0034895
Description Eptesicus fuscus efu-miR-9265 mature miRNA
Sequence 54 - UGAGCACAGAGGCUGUUAGGAGACA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545