Stem-loop efu-mir-1249

Accession

MI0028578

Description

Eptesicus fuscus efu-mir-1249 precursor miRNA

Gene family

MIPF0000667; mir-1249

Sequence

uuugcauggggaggagggaggagaggggccacguucccucugccuggaACGCCCUUCCCCCCCUUCUUCAccuggcgaac
(((((..(((((((((((.((.(((((((...(((((........)))))))))))).))))))))))).))..))))).

Structure

-     au  -         a  a       cac     cuc 
 uuugc  gg ggaggaggg gg gaggggc   guucc   u
 |||||  || ||||||||| || |||||||   |||||    
 aagcg  cc CUUCUUCCC CC CUUCCCG   CAagg   g
c     gu  A         -  C       ---     ucc 

Annotation confidence Not enough data

Genome context

JH977730.1: 1445474-1445553 [-]

Mature efu-miR-1249

• Accession: MIMAT0034894
• Description: Eptesicus fuscus efu-miR-1249 mature miRNA
• Sequence: 49 - ACGCCCUUCCCCCCCUUCUUCA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545