Stem-loop efu-mir-544

Accession

MI0028560

Description

Eptesicus fuscus efu-mir-544 precursor miRNA

Gene family

MIPF0000436; mir-544

Sequence

cauguaguucaguacgucugagcuggggacugagauucugcauuugucACAAGUUCCCAGGUGAUGCUGAuguugcaggu
..(((((.((((((....(.(.(((((((((..(((.........)))...))))))))).).)))))))..)))))...

Structure

-ca     -u      cguc g g         -ga   ucu 
   uguag  ucagua    u a cuggggacu   gau   g
   |||||  ||||||    | | |||||||||   |||   c
   acguu  AGUCGU    A U GACCCUUGA   cug   a
ugg     gu      ---- G G         ACA   uuu 

Annotation confidence Not enough data

Genome context

JH977654.1: 3974509-3974588 [-]

Mature efu-miR-544

• Accession: MIMAT0034878
• Description: Eptesicus fuscus efu-miR-544 mature miRNA
• Sequence: 49 - ACAAGUUCCCAGGUGAUGCUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545