Stem-loop efu-mir-9239

Accession

MI0028529

Description

Eptesicus fuscus efu-mir-9239 precursor miRNA

Sequence

agcagccaucUUCAGAUCACUUUGUAGCUCAUgcuggguggccucaugaagaacacagguggcaucugaccuuggccuguac
.(((((((...((((((((((((((...(((((..((....)).)))))...))).)))))..))))))...))).))))..

Structure

-a    -   ucU      --     -   AGC     cu  g 
  gcag cca   UCAGAU  CACUU UGU   UCAUg  gg u
  |||| |||   ||||||  ||||| |||   |||||  ||  
  uguc ggu   agucua  gugga aca   aguac  cc g
ca    c   ucc      cg     c   aga     -u  g 

Annotation confidence Not enough data

Genome context

JH977637.1: 5073779-5073860 [+]

Mature efu-miR-9239

• Accession: MIMAT0034855
• Description: Eptesicus fuscus efu-miR-9239 mature miRNA
• Sequence: 11 - UUCAGAUCACUUUGUAGCUCAU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545