miRBase entry: efu-mir-9236c

Stem-loop efu-mir-9236c


Accession
MI0028524
Description
Eptesicus fuscus efu-mir-9236c precursor miRNA
Gene family
MIPF0001905; mir-9236


Sequence

ccacuuuauuUUUCUAGUUGUAGGACUUCCAUUCAgccagcuuucaggcuggucugaaugaugauaguucuauauuuuaguuguaauuuugaugu
.....((((....((((.((((((((((((((((((((((((....)))))).)))))))..)).)))))))))..))))..)))).........

Structure
----ccacu    uUUU    -U         -  --       -      u 
         uuau    CUAG  UGUAGGACU UC  CAUUCAg ccagcu u
         ||||    ||||  ||||||||| ||  ||||||| ||||||  
         aaug    gauu  auaucuuga ag  guaaguc ggucgg c
uguaguuuu    --uu    uu         u  ua       u      a 


Annotation confidence Not enough data
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Genome context
JH977796.1: 705042-705136 [+]

Database links

Mature efu-miR-9236c

Accession MIMAT0034851
Description Eptesicus fuscus efu-miR-9236c mature miRNA
Sequence 11 - UUUCUAGUUGUAGGACUUCCAUUCA - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545