miRBase entry: efu-mir-9232

Stem-loop efu-mir-9232


Accession
MI0028509
Description
Eptesicus fuscus efu-mir-9232 precursor miRNA


Sequence

gggccuucuuUUGGAUGUUCUGGGUCUCACUGACucagcugcaguuuguuagguaaguuuagaauucaaaagaccaggcca
.(((((((((((((((..((((((.((..(((((..(((....))).)))))...))))))))))))))))))..))))).

Structure
g     --          GU      U  -CA     uc   u 
 ggccu  ucuuUUGGAU  UCUGGG CU   CUGAC  agc g
 |||||  ||||||||||  |||||| ||   |||||  |||  
 ccgga  agaaaacuua  agauuu ga   gauug  uug c
a     cc          --      -  aug     -u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977626.1: 9397504-9397584 [-]

Database links

Mature efu-miR-9232

Accession MIMAT0034838
Description Eptesicus fuscus efu-miR-9232 mature miRNA
Sequence 11 - UUGGAUGUUCUGGGUCUCACUGAC - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545