miRBase entry: efu-mir-9230c

Stem-loop efu-mir-9230c


Accession
MI0028508
Description
Eptesicus fuscus efu-mir-9230c precursor miRNA
Gene family
MIPF0001949; mir-9230


Sequence

cugacugcucUGAACUCCAGUUCCAGGCUAGACuguggggacacagacucauucggggagaaacuggacugucuggcagcaggcaga
(((.((((((((.(((((((((((.((..((.(((((....))))).))...))..)))...))))))..)).))).))))).))).

Structure
-   a     -   A  --      ---   -A  -CU  A     g 
 cug cugcu cUG AC  UCCAGU   UCC  GG   AG Cugug g
 ||| ||||| ||| ||  ||||||   |||  ||   || |||||  
 gac gacga ggu ug  agguca   agg  cu   uc gacac g
a   g     c   c  uc      aag   gg  uac  a     a 


Annotation confidence Not enough data
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Genome context
JH977699.1: 2125229-2125315 [-]

Database links

Mature efu-miR-9230c

Accession MIMAT0034837
Description Eptesicus fuscus efu-miR-9230c mature miRNA
Sequence 11 - UGAACUCCAGUUCCAGGCUAGAC - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545