miRBase entry: efu-mir-9223c-1

Stem-loop efu-mir-9223c-1


Accession
MI0028492
Description
Eptesicus fuscus efu-mir-9223c-1 precursor miRNA
Gene family
MIPF0001885; mir-9223


Sequence

agggcaguucUCGGGUGACACACCCUGGAAUcaggcucccuccucucugguuccagugugcaugcgucagccgagaaccacagcug
..(((.((((((((.((((.(((.(((((((((((..........))))))))))).))).....)))).))))))))....))).

Structure
ag   ---a        G    ----A   C           cucc 
  ggc    guucUCGG UGAC     CAC CUGGAAUcagg    c
  |||    |||||||| ||||     ||| |||||||||||     
  ucg    caagagcc acug     gug gaccuuggucu    u
-g   acac        g    cguac   u           cucc 


Annotation confidence Not enough data
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Genome context
JH977629.1: 1377129-1377214 [-]

Database links

Mature efu-miR-9223c

Accession MIMAT0034818
Description Eptesicus fuscus efu-miR-9223c mature miRNA
Sequence 11 - UCGGGUGACACACCCUGGAAU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545