miRBase entry: efu-mir-9215b

Stem-loop efu-mir-9215b


Accession
MI0028470
Description
Eptesicus fuscus efu-mir-9215b precursor miRNA
Gene family
MIPF0001893; mir-9215


Sequence

aagagcuccuACACUAGGACGUGUGGCUGCCguggguuggugggaaccaggcucgcccagggucagugcuaccagcguucaguguggucucgugugc
..(((...(((((((.(((((((((((((((.(((((((((....)))).....))))).)).))..)))))..))))))))))))).)))......

Structure
----aa   cuc       A      --     --  -  g     -----    g 
      gag   cuACACU GGACGU  GUGGC  UG CC ugggu     uggu g
      |||   ||||||| ||||||  |||||  || || |||||     ||||  
      cuc   gguguga cuugcg  caucg  ac gg acccg     acca g
cgugug   --u       -      ac     ug  u  g     cucgg    a 


Annotation confidence Not enough data
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Genome context
JH977737.1: 2944775-2944871 [+]

Database links

Mature efu-miR-9215b

Accession MIMAT0034807
Description Eptesicus fuscus efu-miR-9215b mature miRNA
Sequence 11 - ACACUAGGACGUGUGGCUGCC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545