miRBase entry: eca-mir-8937-2

Stem-loop eca-mir-8937-2


Accession
MI0028416
Description
Equus caballus eca-mir-8937-2 precursor miRNA
Gene family
MIPF0001963; mir-8937


Sequence

137 reads, 21 reads per million, 1 experiments
uggaagccgcacaagucacuucccuUCCCGUCCUGAGGGAGCGCUGGGuuccaugcccagcccgcugcagaggcggcugggaacucuauguccuggguggccacaugccca
(((..(((..(((((....(((((...((((((((((.(.(.(((((((.....))))))))).)).))).)))))..)))))..)).)))....)))..)))........

Structure
--------   aa   --gc   -  ucac     uUC     -   -  G A C       u 
        ugg  gcc    aca ag    uuccc   CCGUC CUG AG G G GCUGGGu c
        |||  |||    ||| ||    |||||   ||||| ||| || | | ||||||| c
        acc  ugg    ugu uc    aaggg   ggcgg gac uc c c cgacccg a
acccguac   gg   gucc   a  --uc     -uc     a   g  g - -       u 


Annotation confidence Not enough data
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Genome context
NW_001876707.1: 2744-2854 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-8937-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8937

Accession MIMAT0034466
Description Equus caballus eca-miR-8937 mature miRNA
Sequence 26 - UCCCGUCCUGAGGGAGCGCUGGG - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545