miRBase entry: eca-mir-9183

Stem-loop eca-mir-9183


Accession
MI0028413
Description
Equus caballus eca-mir-9183 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
cgccgggccugucguaaacucauuaccuccagacgucucgCCGGCUCGAUGGCUUUAUGACAacuuggcucguuccuguuuucaaaggccccuagguaucggguuggcugcaggggcggggguacgcagcaccuucugc
....((..(((.(((.........((((((.(.(.(((((((((((((((((((((.(((.(((..((......)).))).))))))))).......))))))))))).).))).))))))))))))))..))......

Structure
--cgcc  gc   u   aaacucauu      a a g   - -           -------      A   C   uu  cu 
      gg  cug cgu         accucc g c ucu c gCCGGCUCGAU       GGCUUU UGA Aac  gg  c
      ||  ||| |||         |||||| | | ||| | |||||||||||       |||||| ||| |||  ||   
      cc  gac gca         uggggg c g gga g cgguugggcua       ccggaa acu uug  cc  g
cgucuu  ac   -   ---------      - - g   c u           uggaucc      -   u   -u  uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr18: 54585543-54585681 [-]

Database links

Mature eca-miR-9183

Accession MIMAT0034764
Description Equus caballus eca-miR-9183 mature miRNA
Sequence 41 - CCGGCUCGAUGGCUUUAUGACA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545