miRBase entry: eca-mir-9168-2

Stem-loop eca-mir-9168-2


Accession
MI0028394
Description
Equus caballus eca-mir-9168-2 precursor miRNA
Gene family
MIPF0002095; mir-9168


Sequence

29 reads, 4 reads per million, 1 experiments
ccggcugccccugcccuuccacuccaacggccucuccucuucugcagugggugggacuggagggcccuggagaccccccAGCACACUCGCUGACUGAGGGAUGaugugagugccaugggccuggggaucugagcauggaugug
((((((.((((.((((...(((((..(((...((.((((.....(((((((((.(.((((.((((......).))).))))).)))))))))...))))))...))))))))....))))..)))).....))).))).....

Structure
-----   -   ----g    -u    -uuc     ca   gcc  u    uucug         g a    a   - cc 
     ccg gcu     cccc  gccc    cacuc  acg   uc ccuc     cagugggug g cugg ggg c  u
     ||| |||     ||||  ||||    |||||  |||   || ||||     ||||||||| | |||| ||| |   
     ggu cga     gggg  cggg    gugag  ugu   AG GGAG     GUCGCUCAC C GAcc ccc g  g
gugua   a   gucua    uc    uacc     --   aGU  -    --UCA         A -    c   a ag 


Annotation confidence Not enough data
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Genome context
chr16: 3269613-3269755 [-]

Database links

Mature eca-miR-9168

Accession MIMAT0034746
Description Equus caballus eca-miR-9168 mature miRNA
Sequence 80 - AGCACACUCGCUGACUGAGGGAUG - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545