miRBase entry: eca-mir-9159

Stem-loop eca-mir-9159


Accession
MI0028383
Description
Equus caballus eca-mir-9159 precursor miRNA


Sequence

13 reads, 2 reads per million, 1 experiments
aaaggugcugcacauguuaccagcgacccugcuagccuugUCCUCUUUCUUUGCUUCCUUCUuuuugaaagaucaagaaugaagcagggaaaggaacaaggagggacagguaaaggauucuggugguuuacggcuuccu
...(((((((..........)))).)))(((((..((((((.(.(((((((((((((.(((((..(.....)..))))).)))))))))))))).))))))..)).)))....((((..(((........)))..))))

Structure
--aaaggugcugcacauguuaccagcgacc   -  ag      C U             C     uu g 
                              cug cu  ccuugU C CUUUCUUUGCUUC UUCUu  u a
                              ||| ||  |||||| | ||||||||||||| |||||  | a
                              gac gg  ggaaca g gaaagggacgaag aagaa  a a
uccuucggcauuugguggucuuaggaaaug   a  ga      a -             u     cu g 


Annotation confidence Not enough data
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Genome context
chr14: 47671870-47672008 [+]

Database links

Mature eca-miR-9159

Accession MIMAT0034736
Description Equus caballus eca-miR-9159 mature miRNA
Sequence 41 - UCCUCUUUCUUUGCUUCCUUCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545