miRBase entry: eca-mir-9145

Stem-loop eca-mir-9145


Accession
MI0028367
Description
Equus caballus eca-mir-9145 precursor miRNA


Sequence

ccccaagugaagaaaagcagcaucaguaucgccugggagcuuguuagaacucgggcccuacccaugaccuuuugaaUUAGCGUUUGAGUUCUGACAAgauccgcaaugauaagugugcucauuaaaguuugggaggu
.((((((........((((.(((...(((((....(((.(((((((((((((((((.(((..((........))...))).))))))))))))))))).)))....))))).)))))))........))))))....

Structure
---c      ugaagaaa    g   cag     ccug   g                 c   -cc  uga 
    cccaag        agca cau   uaucg    gga cuuguuagaacucgggc cua   ca   c
    ||||||        |||| |||   |||||    ||| ||||||||||||||||| |||   ||    
    ggguuu        ucgu gug   auagu    ccu gAACAGUCUUGAGUUUG GAU   gu   c
ugga      gaaauuac    -   --a     aacg   a                 C   Uaa  uuu 


Annotation confidence Not enough data
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Genome context
chr15: 18020410-18020546 [+]

Database links

Mature eca-miR-9145

Accession MIMAT0034721
Description Equus caballus eca-miR-9145 mature miRNA
Sequence 77 - UUAGCGUUUGAGUUCUGACAA - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545