miRBase entry: eca-mir-8908b-2

Stem-loop eca-mir-8908b-2


Accession
MI0028335
Description
Equus caballus eca-mir-8908b-2 precursor miRNA
Gene family
MIPF0001890; mir-8908


Sequence

159 reads, 24 reads per million, 1 experiments
ccaugcugugugcggugcaguauccagaagguacugaucacucagccugcgugUAAUUAGUACCUGUCUGGGUAGAguacgcucaacaaga
......((((.(((.(((..(((((((((((((((((((((.((...)).)))..)))))))))).))))))))..)))))).).)))...

Structure
ccaugc   - u   g   ag        -          --   u  g 
      ugu g gcg ugc  uauccaga agguacugau  cac ca  
      ||| | ||| |||  |||||||| ||||||||||  ||| || c
      aca c cgc aug  AUGGGUCU UCCAUGAUUA  gug gu  
---aga   a u   -   AG        G          AU   c  c 


Annotation confidence Not enough data
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Genome context
chrX: 115875682-115875772 [-]
Clustered miRNAs
14 other miRNAs are < 10 kb from eca-mir-8908b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8908b

Accession MIMAT0034697
Description Equus caballus eca-miR-8908b mature miRNA
Sequence 54 - UAAUUAGUACCUGUCUGGGUAGA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545