miRBase entry: eca-mir-9142

Stem-loop eca-mir-9142


Accession
MI0028327
Description
Equus caballus eca-mir-9142 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
caaaguaucuucauuugucuucuugcugauccucaggacaaaucuauguugaugaauuaguaagggauUCAGUAACACGGAUUUGUCAUGAggguaaaugagaaaaucuacauagaagccc
....((.(((.........((((((...(((((((.(((((((((.(((((.((((((.......)))))).))))).))))))))).)))))))...)))))).........))).))..

Structure
caaa  a   ucauuuguc      cug       g         a     a      ag 
    gu ucu         uucuug   auccuca gacaaaucu uguug ugaauu  u
    || |||         ||||||   ||||||| ||||||||| ||||| ||||||  a
    cg aga         aagagu   ugggAGU CUGUUUAGG ACAAU ACUuag  a
--cc  a   uacaucuaa      aaa       A         C     G      gg 


Annotation confidence Not enough data
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Genome context
chrX: 115885618-115885738 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from eca-mir-9142
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-9142

Accession MIMAT0034695
Description Equus caballus eca-miR-9142 mature miRNA
Sequence 69 - UCAGUAACACGGAUUUGUCAUGA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545