miRBase entry: eca-mir-9126

Stem-loop eca-mir-9126


Accession
MI0028308
Description
Equus caballus eca-mir-9126 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
acauagccuucuacuuuguaauuacucgugugcauucgucUUUUACUCGUUGGUGAGCUCCUuuagaacugagaacucaggagcucauccgugaguggaggaaaaacgcccacaggugucauuccagugcccaaggcug
...(((((((.((((.......((((.(((.((.((..(((((((((((..(((((((((((................)))))))))))..)))))))))))..)).)).))).)))).......))))...)))))))

Structure
aca       --c    uuguaau    c   u  a  cg           UU           uuagaac 
   uagccuu   uacu       uacu gug gc uu  ucUUUUACUCG  GGUGAGCUCCU       u
   |||||||   ||||       |||| ||| || ||  |||||||||||  |||||||||||        
   gucggaa   guga       gugg cac cg aa  aggaggugagu  cuacucgagga       g
---       ccc    ccuuacu    a   c  c  aa           gc           cucaaga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr30: 9271962-9272100 [+]

Database links

Mature eca-miR-9126

Accession MIMAT0034677
Description Equus caballus eca-miR-9126 mature miRNA
Sequence 41 - UUUUACUCGUUGGUGAGCUCCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545