miRBase entry: eca-mir-9112

Stem-loop eca-mir-9112


Accession
MI0028291
Description
Equus caballus eca-mir-9112 precursor miRNA


Sequence

39 reads, 6 reads per million, 1 experiments
uguuccgggcaccuguggagagcccaggcauccagggucuguugcuuuccuuuaaagucAGGCCAUGAUGCUCUCUGAGCCUGgguuaggagcagagaugaag
((((((.(((.((.((..((((....((((((...((((((..(((((.....)))))))))))..))))))))))..))..))))).)))))).........

Structure
---------      g   a  -u  gg    ccca      cag      uu     c 
         uguucc ggc cc  gu  agag    ggcauc   ggucug  gcuuu c
         |||||| ||| ||  ||  ||||    ||||||   ||||||  ||||| u
         acgagg uug gG  CG  UCUC    UCGUAG   CCGGAc  ugaaa u
gaaguagag      a   -  UC  AG    ----      -UA      --     u 


Annotation confidence Not enough data
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Genome context
chr12: 25073375-25073477 [+]

Database links

Mature eca-miR-9112

Accession MIMAT0034661
Description Equus caballus eca-miR-9112 mature miRNA
Sequence 60 - AGGCCAUGAUGCUCUCUGAGCCUG - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545