miRBase entry: eca-mir-9109

Stem-loop eca-mir-9109


Accession
MI0028287
Description
Equus caballus eca-mir-9109 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
ucaaccuggagcaacaacguucuuggcgcuuuuccggguguugggcucuccccuacucggaucguauccuaggaauguccUAACUGUGCCCGUGGGGAGAACUUCacccugagcccgggauuccguuccaagaacugcaaguuga
(((((.((.(........((((((((.((..((((((((...(((.(((((((....(((...((((..(((((...)))))...))))))).)))))))......)))...))))))))....)).))))))))).)).)))))

Structure
     c  g gcaacaac        c  --uu        guu   -----c       uacu   auc    -cc     a 
ucaac ug a        guucuugg gc    uuccgggu   ggg      ucucccc    cgg   guau   uagga  
||||| || |        |||||||| ||    ||||||||   |||      |||||||    |||   ||||   ||||| u
aguug ac u        caagaacc ug    agggcccg   ccc      AGAGGGG    GCC   CGUG   AUccu  
     a  g --------        u  ccuu        agu   aCUUCA       ---U   ---    UCA     g 


Annotation confidence Not enough data
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Genome context
chr11: 5462806-5462950 [-]

Database links

Mature eca-miR-9109

Accession MIMAT0034657
Description Equus caballus eca-miR-9109 mature miRNA
Sequence 81 - UAACUGUGCCCGUGGGGAGAACUUC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545