miRBase entry: eca-mir-9106

Stem-loop eca-mir-9106


Accession
MI0028283
Description
Equus caballus eca-mir-9106 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
cagaccucaagguguccauucuccuggacuUCACGCGAGGCUCUCGAGGUAGggcugacacucuccccggcccugauucucccucuuucagagccuccguuuuaggaauuacacuguug
..........(((((......(((((((....(((.((((((((.((((((((((((..........))))))))......))))....))))))))))))))))))...)))))....

Structure
cagaccucaa     ccauuc       cuUC   C        ---C    ------        acac 
          ggugu      uccugga    ACG GAGGCUCU    GAGG      UAGggcug    u
          |||||      |||||||    ||| ||||||||    ||||      ||||||||     
          ucaca      aggauuu    ugc cuccgaga    cucc      gucccggc    c
------guug     ---uua       ----   -        cuuu    cucuua        cccu 


Annotation confidence Not enough data
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Genome context
chr11: 4187516-4187634 [-]

Database links

Mature eca-miR-9106

Accession MIMAT0034653
Description Equus caballus eca-miR-9106 mature miRNA
Sequence 31 - UCACGCGAGGCUCUCGAGGUAG - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545