miRBase entry: eca-mir-9095

Stem-loop eca-mir-9095


Accession
MI0028271
Description
Equus caballus eca-mir-9095 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
ggauggacaucucuaaccccaggggucuuuugauaggguggcugcauaucaguuggaacguucugccuggcgacagugcaUGAAGGACAAGUUGGUUUCUGGCCAucccucucucccaacuguggguuuuaagacuguccagauc
...(((((((((..(((((((((((......((..(((((((((...((((((((...(.(((((((((....))).))).))).).))).)))))...))))))))).))...)))..))).)))))...))).))))))....

Structure
-gga      -   -cu     -   --   ucuuuu  ua         cau     -   gaa g   -   -   g 
    uggaca ucu   aaccc cag  ggg      ga  ggguggcug   aucag uug   c uuc ugc cug c
    |||||| |||   ||||| |||  |||      ||  |||||||||   ||||| |||   | ||| ||| |||  
    accugu aga   uuggg guc  ccc      cu  ccuACCGGU   UGGUU AAC   G AAG acg gac g
cuag      c   auu     u   aa   ---ucu  -c         CUU     G   --A G   U   u   a 


Annotation confidence Not enough data
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Genome context
chr11: 43019767-43019911 [-]

Database links

Mature eca-miR-9095

Accession MIMAT0034641
Description Equus caballus eca-miR-9095 mature miRNA
Sequence 81 - UGAAGGACAAGUUGGUUUCUGGCCA - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545