miRBase entry: eca-mir-9069

Stem-loop eca-mir-9069


Accession
MI0028242
Description
Equus caballus eca-mir-9069 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
auggaccacguugggcguauccauucgucuguccguggacacucacguggcuuccccguguugacguugugCACGGUGCUGCUGUGGACACGggcgugcgauugucucucggggucccugcccucgu
..(((((.((..(((((.......((((.((((((((..(((....(((((....((((((.........)))))).))))).)))..)))))))).)))).)))))..)).)))))..........

Structure
--------au     a  uu     uauccau    c        ga   ucac     uucc      uga 
          ggacc cg  gggcg       ucgu uguccgug  cac    guggc    ccgugu   c
          ||||| ||  |||||       |||| ||||||||  |||    |||||    ||||||   g
          ccugg gc  ucugu       agcg gcggGCAC  GUG    CGUCG    GGCACg   u
ugcucccguc     g  uc     ------u    u        AG   ---U     ---U      ugu 


Annotation confidence Not enough data
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Genome context
chr3: 32541269-32541395 [+]

Database links

Mature eca-miR-9069

Accession MIMAT0034614
Description Equus caballus eca-miR-9069 mature miRNA
Sequence 72 - CACGGUGCUGCUGUGGACACG - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545