miRBase entry: eca-mir-9063

Stem-loop eca-mir-9063


Accession
MI0028236
Description
Equus caballus eca-mir-9063 precursor miRNA


Sequence

7 reads, 1 reads per million, 1 experiments
agcuugggaauaggggacagacacauguccuucuuuagagcuggcgccuugaccuuacaucaguggugUCCGAGAGCUGCUAUCUGAGAGAcggaacaaggcccugagucucccccuucug
......((((..((((((((...(.(((((.(((((..((.((((((((((((.((((....)))).)).)))).)).)))).)).))))).)).))).)...)))....))))).)))).

Structure
agcuug    ua     ----   aca a   -  u     ag  c    -  -    -  c    a 
      ggaa  gggga    cag   c ugu cc ucuuu  ag uggc gc cuug ac uuac u
      ||||  |||||    |||   | ||| || |||||  || |||| || |||| || ||||  
      ucuu  ccccu    guc   g aca gg AGAGA  UC AUCG CG GAGC Ug ggug c
-----g    -c     cuga   ccg a   a  c     -G  U    U  A    C  u    a 


Annotation confidence Not enough data
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Genome context
chr2: 44648638-44648758 [+]

Database links

Mature eca-miR-9063

Accession MIMAT0034608
Description Equus caballus eca-miR-9063 mature miRNA
Sequence 69 - UCCGAGAGCUGCUAUCUGAGAGA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545