miRBase entry: eca-mir-9048

Stem-loop eca-mir-9048


Accession
MI0028216
Description
Equus caballus eca-mir-9048 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
cggcccuccguaucugugagcucugcaucugcgggauucaaccaaccgcggaucguguauguacugugguuaCCAUCUGCAGUUGGCUGAGCCCacgggugcagaauccaccaauacagaggaccuagu
.((.((((.((((..(((...((((((((((.(((.((((.(((((.((((((.(((.((........))))).)))))).))))).))))))).))))))))))...)))..)))).)))).))....

Structure
---c  c    c    cu   agc          c   a    a     c      c   u  gua 
    gg ccuc guau  gug   ucugcaucug ggg uuca ccaac gcggau gug au   c
    || |||| ||||  |||   |||||||||| ||| |||| ||||| |||||| ||| ||    
    cc ggag caua  cac   agacgugggc CCC GAGU GGUUG CGUCUA Cau ug   u
ugau  a    a    ac   cua          a   -    C     A      C   -  gug 


Annotation confidence Not enough data
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Genome context
chr1: 40605640-40605768 [-]

Database links

Mature eca-miR-9048

Accession MIMAT0034592
Description Equus caballus eca-miR-9048 mature miRNA
Sequence 73 - CCAUCUGCAGUUGGCUGAGCCC - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545