Stem-loop eca-mir-9044

Accession

MI0028211

Description

Equus caballus eca-mir-9044 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ggugacuaugggaugcauccaguagaagaggcauuccgggaggggaggauuuauuccuaaucacagcugucuucauuggaUGAUGGUUGUUGGGAUAUCUUUAAUccagauguucuccuuggauauuguccugugggaaauccca
........((((((...((((.(((....((((.((((((((((.((((((...(((((...(((((((((.((....)).)))))))))))))).......)))))...).)))))).))))...)))))))))))..))))))

Structure

ggugacua      gca    g   aaga    --u    -      g ---     ----uau     auc         u  a 
        ugggau   ucca uag    ggca   uccg ggaggg a   ggauu       uccua   acagcuguc uc u
        ||||||   |||| |||    ||||   |||| |||||| |   |||||       |||||   ||||||||| ||  
        acccua   gggu guc    cugu   aggu ccucuu u   ccUAA       AGGGU   UGUUGGUAG ag u
--------      -aa    -   ----    uau    u      g aga     UUUCUAU     ---         U  g 

Annotation confidence Not enough data

Genome context

chr1: 71044120-71044264 [+]

Mature eca-miR-9044

• Accession: MIMAT0034587
• Description: Equus caballus eca-miR-9044 mature miRNA
• Sequence: 81 - UGAUGGUUGUUGGGAUAUCUUUAAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545