miRBase entry: eca-mir-9041

Stem-loop eca-mir-9041


Accession
MI0028206
Description
Equus caballus eca-mir-9041 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
guacaaucagcucuccaguaucagcgguuccaugugcaugAAUUCAACCAACCGUGGAUUGUgcgguauuauguuuacgauccaugguuaguugaauccaccgauguggcaccuguggauaccgaaggucagcuaaggg
........((((..((.(((((.(((((.((((((...((.(((((((.((((((((((((((((......)))..))))))))))))).))))))).))...)))))).))).)).)))))....))..)))).....

Structure
guacaauc    cu  ---a     a  -   u      gca  A       C             --   gu 
        agcu  cc    guauc gc ggu ccaugu   ug AUUCAAC AACCGUGGAUUGU  gcg  a
        ||||  ||    ||||| || ||| ||||||   || ||||||| |||||||||||||  |||   
        ucga  gg    cauag ug cca ggugua   ac uaaguug uugguaccuagca  ugu  u
---gggaa    cu  aagc     g  u   c      gcc  c       a             uu   au 


Annotation confidence Not enough data
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Genome context
chr25: 27673439-27673577 [-]

Database links

Mature eca-miR-9041

Accession MIMAT0034583
Description Equus caballus eca-miR-9041 mature miRNA
Sequence 41 - AAUUCAACCAACCGUGGAUUGU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545