miRBase entry: eca-mir-9023

Stem-loop eca-mir-9023


Accession
MI0028187
Description
Equus caballus eca-mir-9023 precursor miRNA


Sequence

8 reads, 1 reads per million, 1 experiments
aagcagcuuuguccuggacuucagcgagcuUUGUAUUAAUACGGUAGGUAGUGugggugugaaaucacacugcugcuggaaucgagguugcugagcuggaaguggggcgaggacgcguuag
..((..(((((((((..((((((((.(((............((((((.((((((((........))))))))))))))...........)))..))).))))))))))))))..)).....

Structure
---aa  ag         gg     -   -g   uUUGUAUUAAUA      G        gug 
     gc  cuuuguccu  acuuc agc  agc            CGGUAG UAGUGugg   u
     ||  |||||||||  ||||| |||  |||            |||||| ||||||||    
     cg  ggagcgggg  ugaag ucg  ucg            gucguc gucacacu   g
gauug  ca         --     g   ag   -uuggagcuaag      -        aaa 


Annotation confidence Not enough data
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Genome context
chr26: 39963492-39963612 [-]

Database links

Mature eca-miR-9023

Accession MIMAT0034565
Description Equus caballus eca-miR-9023 mature miRNA
Sequence 31 - UUGUAUUAAUACGGUAGGUAGUG - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545