miRBase entry: eca-mir-9011

Stem-loop eca-mir-9011


Accession
MI0028173
Description
Equus caballus eca-mir-9011 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
aggccguguggugggaggcgaggguggucaggacugccgucgacagggcgacccacuuugggcuccgagaaucugcucaUUCAAGGUCGCUUUGGUGGGGGCAgggcgacagccgccccucggcccaggggagcagugagggc
...((.((.(((..((((.(..(((.(((.(..(((((.((..((((((((((.....(((((...........))))).....))))))))))..)).)))))..)))).)))..))))).))))).)).............

Structure
----------agg  g  u   gg    c ag   g   a ga     g  ga          cacuu     uccg 
             cc ug ggu  gagg g  ggu guc g  cugcc uc  cagggcgacc     ugggc    a
             || || |||  |||| |  ||| ||| |  ||||| ||  ||||||||||     |||||    g
             gg ac ccg  cucc c  ccg cag c  gACGG GG  GUUUCGCUGG     acucg    a
cgggagugacgag  g  -   -g    - cg   a   - gg     G  UG          AACUU     ucua 


Annotation confidence Not enough data
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Genome context
chr8: 20966149-20966291 [-]

Database links

Mature eca-miR-9011

Accession MIMAT0034552
Description Equus caballus eca-miR-9011 mature miRNA
Sequence 80 - UUCAAGGUCGCUUUGGUGGGGGCA - 103
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545