miRBase entry: eca-mir-8989

Stem-loop eca-mir-8989


Accession
MI0028145
Description
Equus caballus eca-mir-8989 precursor miRNA


Sequence

6 reads, 1 reads per million, 1 experiments
ugcucggggucaguggucgccugcgcuuaagggucCUGGUGGCUCUGCCGCAGCcucugugacgcugugaccugcacugagcauaggaaucauaggaaggacucaggggacccaggagcccua
.....(((.((...((((.((((.(((((.((.(((((...(((((((((((((.((...)).))))))....)))..)))).))))).)).)))).....).)))).))))...)).)))..

Structure
ugcuc   g  agu    g    c -----    a  g     GUG    --   ----      c  u 
     ggg uc   gguc ccug g     cuua gg ucCUG   GCUC  UGC    CGCAGC uc  
     ||| ||   |||| |||| |     |||| || |||||   ||||  |||    |||||| || g
     ccc ag   ccag ggac c     ggau cu aggau   cgag  acg    gugucg ag  
---au   g  gac    g    u aggaa    a  a     --a    uc   ucca      c  u 


Annotation confidence Not enough data
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Genome context
chr7: 46202589-46202711 [-]

Database links

Mature eca-miR-8989

Accession MIMAT0034526
Description Equus caballus eca-miR-8989 mature miRNA
Sequence 36 - CUGGUGGCUCUGCCGCAGC - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545