miRBase entry: eca-mir-8978

Stem-loop eca-mir-8978


Accession
MI0028134
Description
Equus caballus eca-mir-8978 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
agggcucgggacguccggggcugggaaggggagguggacgUGAUAGAGACGGGGCGGACCAGGUGcgcggaucucggccucgcgcccucaucgcucgucuuugggguuuccgcccacaugcgcugggacaauucucggucgaagg
..(((.(((((.((((.((((.......(((.((.((((....((((((((((.(((....((((((.((.......)).))))))....)))))))))))))..)))))).)))....)).)).))))...)))))))).....

Structure
---ag   u     --c    g  -  ugggaag   a  u    gUGA          G   ACCA      c  au 
     ggc cggga   gucc gg gc       ggg gg ggac    UAGAGACGGG CGG    GGUGcg gg  c
     ||| |||||   |||| || ||       ||| || ||||    |||||||||| |||    |||||| ||  u
     cug gcucu   cagg uc cg       ccc cc uuug    guuucugcuc gcu    ccgcgc cc  c
ggaag   -     uaa    g  g  ---uaca   g  -    --gg          -   acuc      u  gg 


Annotation confidence Not enough data
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Genome context
chr6: 18961502-18961646 [+]

Database links

Mature eca-miR-8978

Accession MIMAT0034515
Description Equus caballus eca-miR-8978 mature miRNA
Sequence 41 - UGAUAGAGACGGGGCGGACCAGGUG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545