miRBase entry: eca-mir-7045

Stem-loop eca-mir-7045


Accession
MI0028124
Description
Equus caballus eca-mir-7045 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
cgagugacaggcuuuccuugaggugCUGGCGGCCGGGGGAGGGGGAGUugcccguggagacucgcucacucuggccccccggccgccagggcacggucaucguggagcgcu
.........(((.((((.((((((.((((((((((((((.(((.(((((.((...)).))))).)))........)))))))))))))).)).).....))).)))).)))

Structure
cgagugaca   u    u   ----- -  g              -------A   G     g  c 
         ggc uucc uga     g gu CUGGCGGCCGGGGG        GGG GAGUu cc  
         ||| |||| |||     | || ||||||||||||||        ||| ||||| || g
         ucg gagg gcu     c cg gaccgccggccccc        cuc cucag gg  
---------   c    u   acugg a  g              cggucuca   g     a  u 


Annotation confidence Not enough data
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Genome context
chr5: 45556471-45556581 [+]

Database links

Mature eca-miR-7045

Accession MIMAT0034505
Description Equus caballus eca-miR-7045 mature miRNA
Sequence 26 - CUGGCGGCCGGGGGAGGGGGAGU - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545