Stem-loop eca-mir-7177a

Accession

MI0028123

Description

Equus caballus eca-mir-7177a precursor miRNA

Gene family

MIPF0002020; mir-7177

Sequence

4 reads, 1 reads per million, 1 experiments

guucaccuuuuggagguggauuacacuuuucaggacaccagaggaccauagagcaaauuacuucuuccagagugcUAAAUGAUCCCCUGGUGCCCUAGAAagagccguuuaccuccaaaaggugaguuguuuauu
.((((((((((((((((((((..(.(((((.(((.((((((.(((.(((..((((......((((...))))))))..))).))).)))))).))).))))).)..)))))))))))))))))))).........

Structure

--------g                    ua a     c   a      a   c   ag    aauuac    u 
         uucaccuuuuggagguggau  c cuuuu agg caccag gga cau  agca      uucu  
         ||||||||||||||||||||  | ||||| ||| |||||| ||| |||  ||||      |||| c
         gaguggaaaaccuccauuug  g gaAAG UCC GUGGUC CCU GUA  Ucgu      gaga  
uuauuuguu                    cc a     A   C      C   A   AA    ------    c 

Annotation confidence Not enough data

Genome context

chr5: 32967375-32967509 [-]

Mature eca-miR-7177a

• Accession: MIMAT0034504
• Description: Equus caballus eca-miR-7177a mature miRNA
• Sequence: 76 - UAAAUGAUCCCCUGGUGCCCUAGAA - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545