miRBase entry: eca-mir-8965

Stem-loop eca-mir-8965


Accession
MI0028119
Description
Equus caballus eca-mir-8965 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
gagcuccccgaggguucggagacuggcuaacugggagugcucucggccaugggaggccccUUCCCACAUGGCUGCAGUCCUGGCCucuccauuuaucccuuccug
((((((.....))))))(((((..((((....((((.(((....((((((((((((...)))))))..)))))))).)))))))))))))...............

Structure
gagcuccccgaggguuc     cu    aacu    g   ucuc     --       c 
                 ggaga  ggcu    ggga ugc    ggcca  ugggagg  
                 |||||  ||||    |||| |||    |||||  ||||||| c
                 ccucu  CCGG    UCCU ACG    UCGGU  ACCCUUc  
--guccuucccuauuua     --    ----    G   ----     AC       c 


Annotation confidence Not enough data
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Genome context
chr22: 26836787-26836891 [+]

Database links

Mature eca-miR-8965

Accession MIMAT0034500
Description Equus caballus eca-miR-8965 mature miRNA
Sequence 61 - UUCCCACAUGGCUGCAGUCCUGGCC - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545