Accession
MI0028102
Description
Equus caballus
eca-mir-3959 precursor miRNA
Gene family
MIPF0000126;
mir-379
Sequence
1261
reads,
191
reads per million, 1 experiments
gccgaguguuguccaugauaggggaauggaugguugaucagagaacauacauuuuaucaaugaUGUAUGUCAACUGAUCCACAGUCccuaccuauccagagacuucucagg
.(((((....((((..((((((.....((((.((.((((((...(((((((((........)))))))))...)))))).)).))))...))))))..).)))..))).))
.(((((....((((..((((((.....((((.((.((((((...(((((((((........)))))))))...)))))).)).))))...))))))..).)))..))).))
Structure
g - uguu - au ggaau g u aga uua cc gag guc c gauagg ggau gu gaucag acauacauu u || ||| ||| | |||||| |||| || |||||| ||||||||| gg cuc cag g cuaucc cCUG CA CUAGUC UGUAUGUag c - a --uu a ac --auc A C AAC uaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr24: 42921540-42921650 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from eca-mir-3959
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature eca-miR-3959
| Accession | MIMAT0034484 |
| Description | Equus caballus eca-miR-3959 mature miRNA |
| Sequence | 64 - UGUAUGUCAACUGAUCCACAGUC - 86 |
| Evidence |
experimental
Illumina [1] |
References
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