miRBase entry: eca-mir-8952

Stem-loop eca-mir-8952


Accession
MI0028099
Description
Equus caballus eca-mir-8952 precursor miRNA


Sequence

12 reads, 2 reads per million, 1 experiments
uggagucucucccuccuggggguggggguuaaaugaggugcagggagggccugggagcgggcugggcugagcgcUGCCCCCAGGCACGCUGUCGGUGCuguugugaggaccgucuucuggggcagggcuggca
....(((...(((((((.((((.((.((((..(((((((((.((.((((((((((.(((((((......))).)))).))))))).).)).)).))))).))))...)))).)))))).))).))))..))).

Structure
ugga   ucu    -   g    u  g    -aa    -     a  g  - -       a    -   gg 
    guc   cccu ccu gggg gg gguu   auga ggugc gg ag g gccuggg gcgg gcu  g
    |||   |||| ||| |||| || ||||   |||| ||||| || || | ||||||| |||| |||   
    cgg   ggga ggg ucuu cu ccag   uguu uCGUG CU UC C CGGACCC CGUc cga  c
---a   -uc    c   g    -  g    gag    g     G  G  G A       C    g   gu 


Annotation confidence Not enough data
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Genome context
chr23: 24615755-24615887 [-]

Database links

Mature eca-miR-8952

Accession MIMAT0034481
Description Equus caballus eca-miR-8952 mature miRNA
Sequence 75 - UGCCCCCAGGCACGCUGUCGGUGC - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545