miRBase entry: eca-mir-8951

Stem-loop eca-mir-8951


Accession
MI0028098
Description
Equus caballus eca-mir-8951 precursor miRNA


Sequence

13 reads, 2 reads per million, 1 experiments
ugaacuggcccagaacauaauugaauccauguuguUUUUUGAAGACAUUCCUAGAAUCCagugaguuguuuuaaucugauucuaagaaugucuucaaaaacaacauggauucucuugcacaaauucuaagaau
.(((.((((..(((........(((((((((((((((((.((((((((((.(((((((...((((....))))....))))))).)))))))))))))))))))))))))))))).)).))..))).......

Structure
------u   -c  -  cc   acauaauu                 U          C       -Cag    u 
       gaa  ug gc  aga        gaauccauguuguUUUU GAAGACAUUC UAGAAUC    ugag u
       |||  || ||  |||        ||||||||||||||||| |||||||||| |||||||    ||||  
       cuu  ac cg  ucu        cuuagguacaacaaaaa cuucuguaag aucuuag    auuu g
uaagaau   aa  a  -u   --------                 -          a       ucua    u 


Annotation confidence Not enough data
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Genome context
chr23: 19174835-19174967 [+]

Database links

Mature eca-miR-8951

Accession MIMAT0034480
Description Equus caballus eca-miR-8951 mature miRNA
Sequence 36 - UUUUUGAAGACAUUCCUAGAAUCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545