miRBase entry: eca-mir-8941-2

Stem-loop eca-mir-8941-2


Accession
MI0028092
Description
Equus caballus eca-mir-8941-2 precursor miRNA
Gene family
MIPF0001932; mir-8941


Sequence

1845 reads, 258 reads per million, 1 experiments
gcuggagccugaguagcugcagagggaggugaugacacugcagaggacucugcuggggaggcuggcagcacagucUCUGAGAGCCUCUGCAUCAUgccugccuggagggcacgcauccugcaggccucagugaca
(((((.(((((((..(((((..(((.((((.((((...((((((((.((((.(...((((((((......))))))))))))))))))))))))))))).))).....))).))...)).))))).)))))....

Structure
----     a     -  -ua  -   ---ag   g    g    cac        a    g ugg        gc 
    gcugg gccug ag   gc ugc     agg aggu auga   ugcagagg cucu c   ggaggcug  a
    ||||| ||||| ||   || |||     ||| |||| ||||   |||||||| |||| |   ||||||||   
    ugacu cggac uc   cg acg     ucc uccg UACU   ACGUCUCC GAGA G   UCUcugac  g
acag     c     g  cua  c   ggagg   g    -    ---        -    - ---        ac 


Annotation confidence Not enough data
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Genome context
NW_001867688.1: 177560-177694 [-]

Database links

Mature eca-miR-8941

Accession MIMAT0034470
Description Equus caballus eca-miR-8941 mature miRNA
Sequence 76 - UCUGAGAGCCUCUGCAUCAU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545