miRBase entry: eca-mir-8930

Stem-loop eca-mir-8930


Accession
MI0028066
Description
Equus caballus eca-mir-8930 precursor miRNA


Sequence

13 reads, 1 reads per million, 1 experiments
cuaguggugaugcugguuacagcugggaccucggcuggggugucaggcagaacacuuccuauaugugaucUCUCCAUCUGGGCUAGUUUGGGCUUccaaacuagcauggcacuaggucuugagac
((((((.(.(((((((((..((((.((((...((((.(((((...((.(((.(((.........))).))))).))))).)))).)))).))))....))))))))).)))))))..........

Structure
----------      g g         --ac    g    cuc    g     uca  c   a   uuc 
          cuagug u augcugguu    agcu ggac   ggcu gggug   gg aga cac   c
          |||||| | |||||||||    |||| ||||   |||| |||||   || ||| |||   u
          gaucac g uacgaucaa    UCGG UUUG   UCGG UCUAC   UC Ucu gug   a
cagaguucug      - g         accU    G    --A    G     --C  -   a   uau 


Annotation confidence Not enough data
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Genome context
NW_001867699.1: 77594-77718 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from eca-mir-8930
Name Accession Chromosome Start End Strand Confidence




Database links

Mature eca-miR-8930

Accession MIMAT0034458
Description Equus caballus eca-miR-8930 mature miRNA
Sequence 71 - UCUCCAUCUGGGCUAGUUUGGGCUU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545