miRBase entry: eca-mir-8926

Stem-loop eca-mir-8926


Accession
MI0028061
Description
Equus caballus eca-mir-8926 precursor miRNA


Sequence

16 reads, 2 reads per million, 1 experiments
agccagcagugucaccugagcuguaucucuugggcAGAAAGAUCAGAAGGUACACGGGCccuacaaacauuugggaucauaucuaagaaaucugaauuuaguugccagcuggggccgcugcugggaaaggaca
..(((((((((...(((.((((..........(((((..(((((((((((((...(..(((...........)))..).)))))......)))).))))..))))))))).))).))))))))).........

Structure
-------ag         uca   g    guaucucuug     AA    -    ------     CAC GG   uaca 
         ccagcagug   ccu agcu          ggcAG  AGAU CAGA      AGGUA   G  Ccc    a
         |||||||||   ||| ||||          |||||  |||| ||||      |||||   |  |||    a
         ggucgucgc   ggg ucga          ccguu  uuua gucu      ucuau   c  ggg    c
acaggaaag         --c   g    ----------     ga    a    aaagaa     --a ua   uuua 


Annotation confidence Not enough data
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Genome context
NW_001867699.1: 22793-22925 [+]

Database links

Mature eca-miR-8926

Accession MIMAT0034454
Description Equus caballus eca-miR-8926 mature miRNA
Sequence 36 - AGAAAGAUCAGAAGGUACACGGGC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545