Stem-loop eca-mir-8925

Accession

MI0028060

Description

Equus caballus eca-mir-8925 precursor miRNA

Sequence

11 reads, 2 reads per million, 1 experiments

ggcccagaaucuggagggacaugccucaggcgugaaaguuagagcacugaaggugcgagGAGACAUUUCACGCCAGUGGGGAUguuucacagacaccugcccu
(((......((((..(((((((.(((((((((((((((((...(((((...))))).....))).)))))))))..)))))))))))).)))).....)))..

Structure

--   ccagaa    ga       g     --         -   --aga     g 
  ggc      ucug  gggacau ccuca  ggcgugaaa guu     gcacu  
  |||      ||||  ||||||| |||||  ||||||||| |||     ||||| a
  ccg      agac  cuuugUA GGGGU  CCGCACUUU CAG     cgugg  
uc   -uccac    -a       -     GA         A   AGgag     a 

Annotation confidence Not enough data

Genome context

NW_001873716.1: 6628-6730 [+]

Mature eca-miR-8925

• Accession: MIMAT0034453
• Description: Equus caballus eca-miR-8925 mature miRNA
• Sequence: 60 - GAGACAUUUCACGCCAGUGGGGAU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545