miRBase entry: eca-mir-8922

Stem-loop eca-mir-8922


Accession
MI0028057
Description
Equus caballus eca-mir-8922 precursor miRNA


Sequence

27 reads, 4 reads per million, 1 experiments
augcgcggcaagcugccacuuugacccacuguagcgggcggccgccugagugggcuugggucccccagggCUGAGCAGCUCGGCGGGCUGCCACUuugaccaacucuggcggugggccgccagug
.((.(((((..(((((((..(((...((..((.((((.(.((((.(((..(((.((((((...)))))).)))..)))..)))).).)))).))..))..)))...)))))))..)))))))...

Structure
--a  c     aa       -cu   acc  cu  a    g g    -c   ag   g      u 
   ug gcggc  gcugcca   uug   ca  gu gcgg c gccg  cug  ugg cuuggg  
   || |||||  |||||||   |||   ||  || |||| | ||||  |||  ||| |||||| c
   ac cgccg  uggcggu   aac   gu  CA CGUC G CGGC  GAC  GUC ggaccc  
gug  -     gg       cuc   -ca  uU  C    G G    UC   GA   g      c 


Annotation confidence Not enough data
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Genome context
NW_001873686.1: 715-839 [+]

Database links

Mature eca-miR-8922

Accession MIMAT0034450
Description Equus caballus eca-miR-8922 mature miRNA
Sequence 71 - CUGAGCAGCUCGGCGGGCUGCCACU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545