Stem-loop cfa-mir-8904b

Accession

MI0028026

Description

Canis familiaris cfa-mir-8904b precursor miRNA

Gene family

MIPF0001977; mir-8904

Sequence

gaugcccuagggcuccccgggacacUAACAGCACCUGCGCCCCGGGGAGAgugcgccgagcucccuaagggcugcagcgcgcauggcuggaccgggagcagcucggaggggcucg
((.(((((.(((((((((((..(((((...((.(((((((((.((((((..((...))..))))))..)))).)))).).)).))).))..))))).).)))))...))))))).

Structure

-  u     --a     - -     ga  -   ACA  A -    -    -C      Ag  c 
 ga gcccu   gggcu c cccgg  ca cUA   GC C CUGC GCCC  GGGGAG  ug  
 || |||||   ||||| | |||||  || |||   || | |||| ||||  ||||||  || g
 cu cgggg   cucga g gggcc  gu ggu   cg g gacg cggg  ucccuc  gc  
g  -     agg     c a     ag  c   --a  c c    u    aa      ga  c 

Annotation confidence Not enough data

Genome context

chrX: 93909532-93909646 [+]

Mature cfa-miR-8904b

• Accession: MIMAT0034424
• Description: Canis familiaris cfa-miR-8904b mature miRNA
• Sequence: 26 - UAACAGCACCUGCGCCCCGGGGAGA - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545