miRBase entry: cfa-mir-2483

Stem-loop cfa-mir-2483


Accession
MI0028023
Description
Canis familiaris cfa-mir-2483 precursor miRNA
Gene family
MIPF0001532; mir-2483


Sequence

gucucuauggcucucucucagauauuugagugaaaaguucAGUCAACCAUCCAGCUGUUUGAguugaugcaagcaaacaucugguugguugagagaauuuuuuacuuagucucuggauguuuggagucauuuaacaggc
((((..(((((((((((.((((...(((((((((((((((..(((((((.((((.((((((..(((...))).)))))).)))).)))))))..)))))))))))))))..)))))).)...)))))))).....))))

Structure
    ---cu        --- -  u    uau               AG       U    C      Ag   a 
gucu     auggcucu   c uc caga   uugagugaaaaguuc  UCAACCA CCAG UGUUUG  uug  
||||     ||||||||   | || ||||   |||||||||||||||  ||||||| |||| ||||||  ||| u
cgga     uacugagg   g ag gucu   gauucauuuuuuaag  aguuggu gguc acaaac  aac  
    caauu        uuu u  -    -cu               ag       u    u      -g   g 


Annotation confidence Not enough data
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Genome context
chrX: 96560867-96561005 [-]

Database links

Mature cfa-miR-2483

Accession MIMAT0034421
Description Canis familiaris cfa-miR-2483 mature miRNA
Sequence 41 - AGUCAACCAUCCAGCUGUUUGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545