miRBase entry: cfa-mir-508a

Stem-loop cfa-mir-508a


Accession
MI0028020
Description
Canis familiaris cfa-mir-508a precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

cugaguguagugcucUACUUGAGAGGGUGACAUUCAUAGAuacuagaacaugacugucaccuuuuuugaguacaguaaugcacauuauauacaau
....(((((.((((.(((((((((((((((((.((((............)))).))))))).)))))))))).)))).)))))............

Structure
--------cuga     g    c          -       U    AGAua 
            gugua ugcu UACUUGAGAG GGUGACA UCAU     c
            ||||| |||| |||||||||| ||||||| ||||      
            cacgu auga augaguuuuu ccacugu agua     u
uaacauauauua     a    c          u       c    caaga 


Annotation confidence Not enough data
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Genome context
chrX: 115658377-115658471 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from cfa-mir-508a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-508a

Accession MIMAT0034419
Description Canis familiaris cfa-miR-508a mature miRNA
Sequence 16 - UACUUGAGAGGGUGACAUUCAUAGA - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545