miRBase entry: cfa-mir-8813-2

Stem-loop cfa-mir-8813-2


Accession
MI0028003
Description
Canis familiaris cfa-mir-8813-2 precursor miRNA
Gene family
MIPF0002069; mir-8813


Sequence

ucccagggugcuuugcacagacccuggugaccugagguuccccggcugucacucugucccaggcccguccuggccccaggCACAGGCUGAGUCGCAGUAGAGUCUgugggguccugacccuggcgucuggccgccccuggaaggc
..((((((.((...((.(((((((.((.(...(.(((..((((((((((.((((.......((((.((((((....)))).)).)))))))).)))))........))))).))).)))).)).))))))).)))))))).....

Structure
---uc      u  uuu  a     -  u  u acc g   uu     --------     c    uguccca    c  -    g 
     ccaggg gc   gc cagac cc gg g   u agg  ccccg        gcugu acuc       ggcc gu ccug c
     |||||| ||   || ||||| || || |   | |||  |||||        ||||| ||||       |||| || ||||  
     gguccc cg   cg gucug gg cc c   a ucc  ggggu        UGACG UGAG       UCGG CA ggac c
cggaa      -  --c  -     c  u  - --- g   -u     gUCUGAGA     C    -------    A  C    c 


Annotation confidence Not enough data
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Genome context
chr2: 57407598-57407742 [+]

Database links

Mature cfa-miR-8813

Accession MIMAT0034303
Description Canis familiaris cfa-miR-8813 mature miRNA
Sequence 81 - CACAGGCUGAGUCGCAGUAGAGUCU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545