miRBase entry: cfa-mir-769

Stem-loop cfa-mir-769


Accession
MI0027998
Description
Canis familiaris cfa-mir-769 precursor miRNA
Gene family
MIPF0000727; mir-769


Sequence

caucugggcugaccuggugcugauuccugcgcucugaccugagaccucuggguucugagcugugauguuccuuccaagCUGGGAUCUCUGGGGUCUUGGUUcagggucggggccucuggguuaugagcaccagcgaggaca
....((..((...((((((((.((.((((.((((((((((((((((((.(((.(((.((((..((.......))..)))).))).))).))))))))......))))))))))...))))..)).))))))))..))..))

Structure
cauc  gg  gac        g  -u    --c          ------        u   u   g    gu  ug 
    ug  cu   cuggugcu au  ccug   gcucugaccu      gagaccuc ggg ucu agcu  ga  u
    ||  ||   |||||||| ||  ||||   ||||||||||      |||||||| ||| ||| ||||  ||  u
    ac  ga   gaccacga ua  gggu   cggggcuggg      UUCUGGGG CUC AGG UCga  cu  c
----  ag  -gc        g  uu    cuc          acUUGG        U   U   G    ac  uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 109618325-109618465 [-]

Database links

Mature cfa-miR-769

Accession MIMAT0034400
Description Canis familiaris cfa-miR-769 mature miRNA
Sequence 79 - CUGGGAUCUCUGGGGUCUUGGUU - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545