miRBase entry: cfa-mir-8891

Stem-loop cfa-mir-8891


Accession
MI0027996
Description
Canis familiaris cfa-mir-8891 precursor miRNA


Sequence

ugguucgugccgcgggcgcgcucauaaggccccuccucccUACCCAGUUUCGGGGUCGCCUGGUaagguaaaauccuugaacccacucguuccugucgcugggagggcgucccuuucgccugucacagcgucgccgugggacg
.....(((.((((((..(((((....((((.....(.((((.((((((..(((((.((..((((((((......)))))...)))..)).)))))..)))))))))).)........)))).....)))))..)))))).)))

Structure
ugguu   g      gc     -caua    ---cccuc u    A      UU     U  CC   ---     ua 
     cgu ccgcgg  gcgcu     aggc        c cccU CCCAGU  CGGGG CG  UGG   Uaagg  a
     ||| ||||||  |||||     ||||        | |||| ||||||  ||||| ||  |||   |||||   
     gca ggugcc  ugcga     uccg        g ggga gggucg  guccu gc  acc   guucc  a
-----   g      gc     cacug    cuuucccu c    -      cu     u  uc   caa     ua 


Annotation confidence Not enough data
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Genome context
chr1: 104785535-104785677 [+]

Database links

Mature cfa-miR-8891

Accession MIMAT0034398
Description Canis familiaris cfa-miR-8891 mature miRNA
Sequence 41 - UACCCAGUUUCGGGGUCGCCUGGU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545