miRBase entry: cfa-mir-8889

Stem-loop cfa-mir-8889


Accession
MI0027992
Description
Canis familiaris cfa-mir-8889 precursor miRNA


Sequence

uccugacguuggggccugagaggcaguucugaggacagcagaccugaccugggccugcagcuuauggguuccUGCGCUGGGUCCCAGCAGGUCAgcuggacccuggccucuggcccccugaugccaggu
.((((.((((((((((..((((((......(.(..((((.((((((..(((((((..((((.((.((...)))).)))))).))))))))))).))))..).)..))))))))))))..)))).)))).

Structure
u    a    --      ug      aguucu a ga    a      ac     -  ug    u  u  g 
 ccug cguu  ggggcc  agaggc      g g  cagc gaccug  cuggg cc  cagc ua gg  
 |||| ||||  ||||||  ||||||      | |  |||| ||||||  ||||| ||  |||| || || u
 ggac guag  ccccgg  ucuccg      c c  gucg CUGGAC  GACCC GG  GUCG GU cc  
u    c    uc      --      ----gu c ag    A      --     U  --    C  -  u 


Annotation confidence Not enough data
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Genome context
chr9: 47791955-47792083 [-]

Database links

Mature cfa-miR-8889

Accession MIMAT0034394
Description Canis familiaris cfa-miR-8889 mature miRNA
Sequence 73 - UGCGCUGGGUCCCAGCAGGUCA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545