miRBase entry: cfa-mir-8888

Stem-loop cfa-mir-8888


Accession
MI0027990
Description
Canis familiaris cfa-mir-8888 precursor miRNA


Sequence

ggcagccagagucuggccuccuguagcuguuccaucaguggaugcagacuuaaccagugcccaaugcaUACUGGUUAAUUUCAACUCCACUggucacagggaagggagacuuugguaggag
....((((((((((..(((((.....((((...(((((((((((.(((.(((((((((((.....))..))))))))))))))..))))))))).)))))).))).)))))))))).....

Structure
-ggca          gg   -  uguag    ucc         --  c   c         --  c 
     gccagagucu  ccu cc     cugu   aucagugga  ug aga uuaaccagu  gc c
     ||||||||||  ||| ||     ||||   |||||||||  || ||| |||||||||  || a
     ugguuucaga  gga gg     gaca   uggUCACCU  AC UUU AAUUGGUCA  cg a
gagga          -g   a  -----    --c         CA  -   -         Ua  u 


Annotation confidence Not enough data
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Genome context
chr9: 22156111-22156231 [-]

Database links

Mature cfa-miR-8888

Accession MIMAT0034392
Description Canis familiaris cfa-miR-8888 mature miRNA
Sequence 69 - UACUGGUUAAUUUCAACUCCACU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545